rs4144797 chr2:232697487 T>C
- Sequence
ggccgcctgtgtctccggtccgcg[T/C]tcgcgcccctgctcctcctgcccg
- ASB in cell types
- A549 (lung carcinoma) LNCaP C4-2B (prostate carcinoma) iPS-derived dermal fibroblasts
- ASB for transcription factors
- RFOX2_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RFOX2_HUMAN | 1.82 | 0.32 | 4.00 | n/a | n/a | |||
| SMC3_HUMAN | 1.42 | -0.58 | 1.00 | n/a | n/a |
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