ADASTRA v5.1.3
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rs416768
chr1:220690029
C
>
G
Sequence
cgtgactatctcgccatgccctcc[C/G]tagcactgagcgtgatctctagta
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
GM19239 (male B-cells lymphoblastoid cell line)
GM02630 (Fanconi anemi)
ASB for transcription factors
STAG1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
0.23
1.89
1.00
0.01
1.07
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
height
,
ldl cholesterol
GTEx eQTL
Artery_Tibial
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Pancreas
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)