rs42045 chr7:92621040 C>T

Sequence
ataggtccattaaaaatgcttgca[C/T]ttaattccactatttggactgctg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) tibial nerve
ASB for transcription factors
ELF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ELF1_HUMAN n/a 2.49 1.000.01 1.00 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  height,  infant head circumference,  parkinsons disease
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

Download