rs4248 chr18:4026708 A>T

Sequence
cattttctatttctgattctttgg[A/T]cacacagggactttctgggctatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN RELB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -2.94 2.75 1.001.7·10-5 1.25 n/a No Hit
IKZF2_HUMAN -1.61 2.48 1.009.8·10-4 2.00 n/a n/a
RELB_HUMAN -1.97 2.47 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP maternal transmission distortion transmission distortion

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