rs4341773 chr16:46390867 C>T
- Sequence
cgaatggaatcatcaaatggaatc[C/T]aatggaatcatcatcaaatggatt
- ASB in cell types
- GM18951 (B-cells Lymphoblastoid Cell Lines) GBM39 (Human brain tumor) esophagus squamous epithelium GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN837_HUMAN IKZF2_HUMAN TBX3_HUMAN SP2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN837_HUMAN | 2.30 | n/a | 3.00 | n/a | n/a | |||
| IKZF2_HUMAN | 1.58 | n/a | 4.00 | n/a | n/a | |||
| TBX3_HUMAN | n/a | 0.60 | 2.00 | n/a | No Hit | |||
| SP2_HUMAN | n/a | 1.04 | 2.00 | n/a | No Hit | |||
| PRDM4_HUMAN | n/a | 0.73 | 2.00 | n/a | n/a |
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