rs4349173 chr16:46390834 G>A
- Sequence
atggaatcgaatggaatcatcatc[G/A]aatggaatcgaatggaatcatcaa
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- CTCF_HUMAN SP7_HUMAN ZBT11_HUMAN ZN555_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.99 | -0.73 | 3.55 | n/a | No Hit | |||
| SP7_HUMAN | 2.22 | n/a | 2.50 | n/a | n/a | |||
| ZBT11_HUMAN | 2.12 | n/a | 3.00 | n/a | n/a | |||
| ZN555_HUMAN | 1.49 | n/a | 4.00 | n/a | n/a | |||
| ZN189_HUMAN | 1.95 | n/a | 2.50 | n/a | n/a |
Items per page:
1 – 5 of 92
Motif analysis
