rs4404093 chr16:46389974 C>G
- Sequence
aatggactcgaatggaatcatcat[C/G]gtatggaatcgaatggaatcatca
- ASB in cell types
- WA09 (embryonic stem cells) prostate cancer LNCaP C4-2 (prostate carcinoma) GM18505 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- ANDR_HUMAN PRDM9_HUMAN RAD21_HUMAN ZN143_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.60 | -0.28 | 3.59 | n/a | No Hit | |||
| PRDM9_HUMAN | 2.28 | -0.72 | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.48 | -0.32 | 2.08 | n/a | n/a | |||
| ZN143_HUMAN | 2.45 | -1.25 | 1.75 | n/a | No Hit | |||
| STAG1_HUMAN | 1.24 | 0.57 | 2.12 | n/a | n/a |
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