rs4414128 chr10:5630056 C>T
- Sequence
gagctctgcagtgcacagcctggg[C/T]agctggaggcagcagccctgtatc
- ASB in cell types
- pancreas K562 (myelogenous leukemia) SK-N-AS (neuroblastoma) GM02255 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAT1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.97 | 0.56 | 1.44 | -4.97 | Concordant | |||
| STAT1_HUMAN | -0.60 | 2.17 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -1.21 | 2.13 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
