rs4472547 chr8:116671607 C>T
- Sequence
tctaactgtgccagaccttctagg[C/T]gctgtccagcatagggcagtaaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 2.38 | 0.45 | 1.69 | -0.63 | Weak Concordant |
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Motif analysis
