rs4498340 chr6:15556976 A>G

Sequence
gttcagcttgactgctttggagcc[A/G]ttagattctagataaggcctgggg
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts
ASB for transcription factors
GATA1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN -1.95 2.56 1.002.4·10-4 1.75 0.62 Weak Concordant
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Motif analysis

GATA1_HUMAN Weak Concordant
GATA1_HUMAN pic

Genetic associations

GRASP ldl cholesterol total cholesterol
GTEx eQTL Muscle_Skeletal Whole_Blood

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