rs4520712 chr13:95226686 A>G
- Sequence
aatctctacccttgccaatctgcc[A/G]ctagaggacttcatggagtcttct
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.57 | 0.27 | 1.50 | -0.98 | Weak Concordant | |||
| STAG1_HUMAN | 1.82 | -0.09 | 3.00 | n/a | n/a |
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Motif analysis
