rs4552308 chr3:127304482 C>T
- Sequence
tactgtactgtacctgcctgcccc[C/T]tcccgggtgcgatacacaaagctc
- ASB in cell types
- BEAS-2B (bronchial epithelium) foreskin keratinocyte breast tumor
- ASB for transcription factors
- GCR_HUMAN CTCF_HUMAN PRGR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.32 | 0.61 | 1.48 | n/a | No Hit | |||
| CTCF_HUMAN | 0.91 | 0.73 | 1.43 | -5.10 | Concordant | |||
| PRGR_HUMAN | 3.02 | -0.32 | 1.50 | n/a | No Hit |
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Motif analysis
