rs4573669 chr11:43681031 G>A

Sequence
gcgtcctcgctcccgcggcggccc[G/A]gaccaggcctgggccgtgatgact
ASB in cell types
HEK293 (embryonic kidney) 22RV1 (prostate carcinoma) GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 0.25 2.53 1.000.03 1.83 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  height,  refractive error,  total cholesterol,  years of education
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Thyroid,  Whole_Blood

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