rs4574055 chr2:141490458 A>G
- Sequence
ttatcagtttaactgcaagttggc[A/G]cctgaatccaaaaagtataggtta
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.39 | -0.03 | 1.73 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP abnormal involuntary movement scale, glaucoma (primary open-angle glaucoma), resistance to kuru in aged women despite likely exposure, sporadic creutzfeldt-jakob disease, tardive dyskinesia