rs4600523 chr17:62113012 A>T
- Sequence
gcgggtggatcacgaagtcaggag[A/T]ttgagaccatcctggccaacatgg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GATA3_HUMAN ZBT40_HUMAN NFIB_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA3_HUMAN | n/a | 3.68 | 3.00 | n/a | No Hit | |||
| ZBT40_HUMAN | n/a | 3.50 | 3.00 | n/a | n/a | |||
| NFIB_HUMAN | n/a | 3.72 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -0.86 | 2.93 | 2.50 | n/a | n/a | |||
| SIN3A_HUMAN | n/a | 3.26 | 3.00 | n/a | n/a |
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