rs4655194 chr1:20323321 T>C

Sequence
gtccccaggagtacctcttgaccc[T/C]gattgcccaatcagagtgttcttt
ASB in cell types
BEAS-2B (bronchial epithelium) MCF10A (breast epithelial cells)
ASB for transcription factors
NCOA3_HUMAN GCR_HUMAN TEAD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NCOA3_HUMAN n/a 4.67 1.001.4·10-15 1.00 n/a n/a
GCR_HUMAN 2.91 -0.73 5.9·10-141.00 1.08 n/a No Hit
TEAD4_HUMAN -2.43 2.73 1.002.1·10-5 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Hypothalamus Testis

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