ADASTRA v5.1.3
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rs4655194
chr1:20323321
T
>
C
Sequence
gtccccaggagtacctcttgaccc[T/C]gattgcccaatcagagtgttcttt
ASB in cell types
BEAS-2B (bronchial epithelium)
MCF10A (breast epithelial cells)
ASB for transcription factors
NCOA3_HUMAN
GCR_HUMAN
TEAD4_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NCOA3_HUMAN
n/a
4.67
1.00
1.4·10
-15
1.00
n/a
n/a
GCR_HUMAN
2.91
-0.73
5.9·10
-14
1.00
1.08
n/a
No Hit
TEAD4_HUMAN
-2.43
2.73
1.00
2.1·10
-5
1.00
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Hypothalamus
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)