rs4657150 chr1:162132274 C>T

Sequence
tccttggattctttgggaaggtga[C/T]gcacattggaggaaatgcaactca
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
CREB1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN 2.06 n/a 0.051.00 1.00 -3.54 Concordant
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Motif analysis

CREB1_HUMAN Concordant
CREB1_HUMAN pic

Genetic associations

GRASP bipolar disorder,  birth weight,  body mass index (bmi),  schizophrenia
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Brain_Cerebellar_Hemisphere,  Breast_Mammary_Tissue,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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