ADASTRA v5.1.3
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Bill Cipher
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rs4657188
chr1:162378087
G
>
C
Sequence
atcacaacatgtcaactagataca[G/C]agcagggctgcagatctagatggc
ASB in cell types
WA09 (embryonic stem cells)
ASB for transcription factors
EOMES_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EOMES_HUMAN
-2.60
2.70
1.00
5.2·10
-3
1.00
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
monocyte count
,
serum creatinine
,
total cholesterol change with statins
GTEx eQTL
Brain_Cerebellum
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)