rs4658547 chr1:243227829 T>G

Sequence
ccttgtaaggtttaccgaaggcct[T/G]tggactgagagctttgagaatagt
ASB for transcription factors
HNF4A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HNF4A_HUMAN 2.08 -1.54 0.041.00 1.50 -4.32 Concordant
Items per page:
1 – 1 of 1

Motif analysis

HNF4A_HUMAN Concordant
HNF4A_HUMAN pic

Genetic associations

GRASP college completion,  rheumatoid arthritis,  salmonella-induced pyroptosis,  years of education
GTEx eQTL Adipose_Subcutaneous,  Adrenal_Gland,  Brain_Cortex,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Liver,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

Download