rs4668809 chr2:13545582 C>T

Sequence
ccaatgtgacagtgacagaaagat[C/T]gttattcctcacagtttaggagcc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
REQU_HUMAN EP300_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REQU_HUMAN -2.84 2.74 1.007.1·10-3 1.00 n/a n/a
EP300_HUMAN -2.76 2.69 1.000.01 1.25 n/a n/a
IKZF2_HUMAN -2.92 1.29 1.000.03 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP response to lithium treatment for bipolar disorder schizophrenia
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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