rs4676426 chr2:240561257 C>G
- Sequence
cgggttgggcggggcccactctta[C/G]agctgggcccgccttggcccctgc
- ASB in cell types
- foreskin keratinocyte HepG2 (hepatoblastoma) A549 (lung carcinoma) brain prefrontal cortex region tissues
- ASB for transcription factors
- RBM25_HUMAN SIN3A_HUMAN CREB1_HUMAN OLIG2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | -0.48 | 2.39 | 2.00 | n/a | n/a | |||
| SIN3A_HUMAN | 2.56 | 1.02 | 1.60 | n/a | n/a | |||
| CREB1_HUMAN | 1.60 | -0.18 | 1.86 | n/a | No Hit | |||
| OLIG2_HUMAN | 1.82 | -0.50 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid