rs4677147 chr3:72337089 G>C

Sequence
tgctcgggcttatgccaggaggcc[G/C]ccccctaccccagcaagggcggcg
ASB in cell types
breast tumor HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ESR1_HUMAN PRGR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.16 3.02 0.821.2·10-4 1.80 n/a No Hit
PRGR_HUMAN 0.54 2.72 1.007.6·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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