rs4697721 chr4:10172593 G>C
- Sequence
ttttgcattttggacatattccag[G/C]ctcagcagttgtttgcccccccaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF1_HUMAN MAFG_HUMAN SMCA4_HUMAN EMSY_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 4.05 | n/a | 2.00 | n/a | No Hit | |||
| MAFG_HUMAN | 3.08 | -5.59 | 2.00 | -0.60 | Weak Concordant | |||
| SMCA4_HUMAN | 2.16 | -4.50 | 2.00 | n/a | n/a | |||
| EMSY_HUMAN | 2.67 | n/a | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP gout, hdl cholesterol change with statins, microalbuminuria, serum urate, systolic blood pressure (sbp), uric acid, waist hip ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Testis, Thyroid, Whole_Blood