rs4723220 chr7:32914420 A>G
- Sequence
cccctactgctggctgttggtggg[A/G]tccagagcataggtgatggactgg
- ASB in cell types
- HT1080 (fibrosarcoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SSRP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.07 | 1.19 | n/a | No Hit | |||
| RAD21_HUMAN | 1.55 | -0.49 | 1.11 | n/a | n/a | |||
| SSRP1_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Esophagus_Muscularis, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood