rs4744502 chr9:90796293 A>G
- Sequence
gtatcacaatgaggccacactcca[A/G]cctcccagaaaccatatattgtgc
- ASB in cell types
- MDM(monocyte derived macrophages) CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN SPI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.77 | -5.29 | 2.00 | -0.39 | Weak Concordant | |||
| SPI1_HUMAN | 1.81 | 0.72 | 1.27 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg