ADASTRA v5.1.3
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rs4751162
chr10:130110342
G
>
A
Sequence
gtgaacgagactcaggaacagtca[G/A]gtgtagacggcaggagaagacatg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
ZFX_HUMAN
BRD4_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN
-0.61
1.99
1.00
6.1·10
-3
1.00
n/a
No Hit
BRD4_HUMAN
0.07
1.21
1.00
0.01
1.71
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
hypertension (early onset hypertension)
,
parkinsons disease
,
variant creutzfeldt-jakob disease
GTEx eQTL
Esophagus_Mucosa
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)