rs4774800 chr15:55658743 C>T

Sequence
ctagaaaagttgtatattaattta[C/T]attctcgcttttagtatgggtgtg
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
ASB for transcription factors
SMRC1_HUMAN SMCA4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMRC1_HUMAN -1.29 2.56 1.005.0·10-6 2.00 n/a n/a
SMCA4_HUMAN -0.52 2.00 0.993.4·10-3 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder cystatin c in serum late onset alzheimers disease serum creatinine type 2 diabetes years of education
GTEx eQTL Muscle_Skeletal Skin_Sun_Exposed_Lower_leg Thyroid

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