rs4802308 chr19:46362137 A>G
- Sequence
aaaaccacatcttagacgttctgt[A/G]tacagaattgtttctcttggttat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- ELF1_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | n/a | 2.49 | 1.00 | n/a | No Hit | |||
| SMCA4_HUMAN | 0.22 | 1.12 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Colon_Sigmoid, Esophagus_Mucosa, Heart_Left_Ventricle, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood