rs4813975 chr20:11261830 G>A

Sequence
caccttgtgagcactcctgctggt[G/A]ggaaaccccagggctttgggagga
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN ELF1_HUMAN BHE40_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN 2.05 -3.45 3.2·10-31.00 1.50 n/a n/a
ELF1_HUMAN 2.27 -2.27 0.041.00 1.00 n/a No Hit
BHE40_HUMAN 2.24 -2.06 0.041.00 1.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

Download