rs4815467 chr20:2652598 A>C
- Sequence
ggggggcgggggcgtggcctctgg[A/C]gcctggttccgcgcgccggagcgc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) ME-1 (acute myeloid leukemia ) WA01 (H1, human embryonic stem cells) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- BHE40_HUMAN TAF1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BHE40_HUMAN | 0.68 | -0.68 | 1.00 | n/a | No Hit | |||
| TAF1_HUMAN | 2.38 | -0.32 | 1.33 | 2.31 | Discordant |
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Motif analysis
