ADASTRA v5.1.3
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rs4843049
chr15:85331141
G
>
A
Sequence
agtctgactcatgcactggcctgc[G/A]gaacagaccacaactctgcctggt
ASB in cell types
22RV1 (prostate carcinoma)
A549 (lung carcinoma)
esophagus muscularis mucosa
SYO-1(Biphasic synovial sarcoma)
ASB for transcription factors
ANDR_HUMAN
TEAD3_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN
2.61
-0.24
4.1·10
-3
1.00
1.67
n/a
No Hit
TEAD3_HUMAN
2.54
-2.58
0.01
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
ldl cholesterol
,
total cholesterol
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Amygdala
,
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Hypothalamus
,
Brain_Putamen_basal_ganglia
,
Brain_Substantia_nigra
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Nerve_Tibial
,
Pancreas
,
Pituitary
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)