rs4844540 chr1:206563245 G>A
- Sequence
agtgaagtacagctgtgagccctg[G/A]tagaaaaggaagcaggttgtggtg
- ASB in cell types
- SKH1 (chronic myelogenous leukemia, BCR-ABL1 positive) ME-1 (acute myeloid leukemia ) GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- GATA2_HUMAN MECOM_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GATA2_HUMAN | -0.32 | 2.63 | 1.20 | n/a | No Hit | |||
| MECOM_HUMAN | 0.13 | 1.19 | 1.00 | n/a | n/a | |||
| FOXK2_HUMAN | n/a | 2.89 | 4.00 | n/a | n/a |
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