rs485618 chr1:160830690 T>C

Sequence
tgtgctctgggtgatttttctact[T/C]agagatgggcttgctttgcaccat
ASB in cell types
A549 (lung carcinoma) GM19240 (B cells Lymphoblastoid Cell Lines)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma) 0.91 0.24 5.0·10-30.89 2.00
GM19240 (B cells Lymphoblastoid Cell Lines) -0.88 0.70 1.000.01 1.11
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Motif analysis

No data available

Genetic associations

GRASP graves disease hip bone mineral density (bmd) salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Whole_Blood

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