ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs485618
chr1:160830690
T
>
C
Sequence
tgtgctctgggtgatttttctact[T/C]agagatgggcttgctttgcaccat
ASB in cell types
A549 (lung carcinoma)
GM19240 (B cells Lymphoblastoid Cell Lines)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
A549 (lung carcinoma)
0.91
0.24
5.0·10
-3
0.89
2.00
GM19240 (B cells Lymphoblastoid Cell Lines)
-0.88
0.70
1.00
0.01
1.11
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
graves disease
,
hip bone mineral density (bmd)
,
salmonella-induced pyroptosis
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale