rs4866580 chr5:2289140 G>A
- Sequence
agctggcagtcacgtggcgagtgc[G/A]gggagcaagtgggcggaggaggaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EGR1_HUMAN SP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | 1.98 | -1.43 | 1.00 | -2.40 | Concordant | |||
| SP1_HUMAN | 2.27 | -1.79 | 1.00 | -3.63 | Concordant |
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Motif analysis
