rs4872399 chr8:26089221 A>G
- Sequence
cgcccagagcagctcgtgcaaacc[A/G]gaccaccctaagacagcccaccca
- ASB in cell types
- BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 1.53 | n/a | 1.00 | n/a | No Hit | |||
| CTCF_HUMAN | 1.21 | -0.02 | 1.22 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, hdl cholesterol, neuroblastoma (brain cancer), refractive error, systolic blood pressure (sbp)