rs487857 chr18:10038213 G>A
- Sequence
cacaggggaatgacgtgatcagta[G/A]taagaggaagaagacagactggaa
- ASB for transcription factors
- ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | -1.64 | 2.19 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, infant head circumference, irritible bowel syndrome, ldl cholesterol, lp-pla2 activity, obesity with early age of onset (age >2), transmission distortion
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Breast_Mammary_Tissue, Colon_Sigmoid, Muscle_Skeletal, Testis, Thyroid