ADASTRA v5.1.3
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rs4890574
chr18:45689122
A
>
G
Sequence
aacacatcacaccacaacctgtga[A/G]taactcatcttccccaacacatta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
Th1-cells
ASB for transcription factors
TBX21_HUMAN
NFAC3_HUMAN
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0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN
1.97
-0.23
0.02
1.00
1.00
n/a
No Hit
NFAC3_HUMAN
2.36
-2.38
0.04
1.00
1.00
n/a
No Hit
Items per page:
5
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_EBV-transformed_lymphocytes
,
Muscle_Skeletal
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)