rs4890574 chr18:45689122 A>G

Sequence
aacacatcacaccacaacctgtga[A/G]taactcatcttccccaacacatta
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) Th1-cells
ASB for transcription factors
TBX21_HUMAN NFAC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TBX21_HUMAN 1.97 -0.23 0.021.00 1.00 n/a No Hit
NFAC3_HUMAN 2.36 -2.38 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_EBV-transformed_lymphocytes Muscle_Skeletal

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