rs4899527 chr14:74620733 C>G
- Sequence
gcaccatcatttaccagttatgtg[C/G]cctgggctaagtgactcattgagc
- ASB in cell types
- Th1-cells BEAS-2B (bronchial epithelium) TTC-1240 (Rhabdoid tumor of the kidney) HCT-116 (colon carcinoma)
- ASB for transcription factors
- TBX21_HUMAN GCR_HUMAN ARI1A_HUMAN SSXT_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | -1.23 | 1.68 | 1.00 | n/a | No Hit | |||
| GCR_HUMAN | 0.81 | -0.02 | 1.47 | n/a | No Hit | |||
| ARI1A_HUMAN | 2.59 | -2.46 | 1.00 | n/a | n/a | |||
| SSXT_HUMAN | 1.80 | -1.41 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, adiponectin levels, birth weight, systolic blood pressure (sbp), triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood