rs490055 chr6:85361286 A>T
- Sequence
atgacagccaaagcaccatgaata[A/T]tgatttgagggttaaataaataaa
- ASB in cell types
- TTC-1240 (Rhabdoid tumor of the kidney) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SMCA4_HUMAN PKNX1_HUMAN MAFK_HUMAN SSXT_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMCA4_HUMAN | 2.15 | -0.02 | 1.00 | n/a | n/a | |||
| PKNX1_HUMAN | 2.44 | -2.11 | 1.00 | n/a | No Hit | |||
| MAFK_HUMAN | 2.31 | -2.01 | 1.00 | n/a | No Hit | |||
| SSXT_HUMAN | 2.83 | -2.70 | 1.00 | n/a | n/a |
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