rs4969323 chr17:80981289 C>G
- Sequence
cttaggggtctgcgggtctctccc[C/G]caggggtgtggggtcctgcctcct
- ASB in cell types
- foreskin keratinocyte 2588 (Lymphoblastoid Cell Lines) neural cell GM10847 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.49 | 1.67 | 1.35 | n/a | No Hit | |||
| STAG1_HUMAN | -0.41 | 0.60 | 1.23 | n/a | n/a | |||
| RAD21_HUMAN | n/a | 0.73 | 1.33 | n/a | n/a |
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