rs4972902 chr2:227546098 C>T
- Sequence
atgccctgcccccagtggtggagt[C/T]tatagaggcaggcaggccttgttg
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) MS-1 (Small cell lung carcinoma) GM19239 (male B-cells lymphoblastoid cell line) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -0.21 | 1.58 | 1.03 | n/a | n/a | |||
| CTCF_HUMAN | 0.56 | 1.05 | 1.33 | n/a | No Hit |
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