rs498393 chr1:66301115 A>G
- Sequence
ttcctgcgtgctcatgaaaggccc[A/G]tagtacagctatgagtatattcca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CAR-T cells SK-MEL-147 (melanoma)
- ASB for transcription factors
- ZN217_HUMAN PAX8_HUMAN IRF4_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN217_HUMAN | -3.35 | 3.39 | 1.00 | n/a | n/a | |||
| PAX8_HUMAN | -3.52 | 3.41 | 1.00 | n/a | n/a | |||
| IRF4_HUMAN | -1.40 | 2.20 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.99 | 2.23 | 1.00 | n/a | n/a | |||
| BRD2_HUMAN | 0.09 | 3.03 | 1.83 | n/a | n/a |
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