rs498448 chr1:66301097 C>T
- Sequence
agacacttagaagaaaagttcctg[C/T]gtgctcatgaaaggcccatagtac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CAR-T cells SK-MEL-147 (melanoma)
- ASB for transcription factors
- ZN217_HUMAN IKZF2_HUMAN PAX8_HUMAN IRF4_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN217_HUMAN | -3.84 | 3.53 | 1.00 | n/a | n/a | |||
| IKZF2_HUMAN | -1.65 | 2.36 | 1.00 | n/a | n/a | |||
| PAX8_HUMAN | -3.52 | 3.41 | 1.00 | n/a | n/a | |||
| IRF4_HUMAN | -1.50 | 2.01 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.33 | 2.13 | 1.17 | n/a | No Hit |
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