rs4984516 chr15:96184934 C>T
- Sequence
gaggaggaaagtctgagtgtatct[C/T]tacaatttattcaacggtttctct
- ASB in cell types
- 22RV1 (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 0.04 | 2.38 | 1.50 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.67 | 2.09 | 1.50 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, bipolar disorder, body mass index (bmi)