rs4993022 chr16:57629021 C>A
- Sequence
tgtgagtgtgagagtgtgactgag[C/A]gtttgagtgtgagagtgtgagtga
- ASB in cell types
- HEK293 (embryonic kidney) K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ARI1B_HUMAN RING2_HUMAN HDAC2_HUMAN INSM2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 3.65 | n/a | 2.00 | n/a | n/a | |||
| RING2_HUMAN | 3.34 | n/a | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 3.12 | -5.64 | 2.00 | n/a | n/a | |||
| INSM2_HUMAN | 3.15 | -3.29 | 1.00 | n/a | n/a | |||
| GLIS2_HUMAN | 2.38 | n/a | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 6
Motif analysis
No data available
Genetic associations
GRASP 2 hour glucose, cystatin c in serum, total cholesterol, triglycerides, urinary albumin-to-creatinine ratio