rs4997232 chr9:122819894 C>T
- Sequence
aagcctggcttcctgtttatacaa[C/T]tgtaagtcaccttattgctagcta
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) 22RV1 (prostate carcinoma) MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 0.90 | -0.10 | 1.64 | -0.11 | Weak Concordant | |||
| ANDR_HUMAN | 2.83 | -3.10 | 2.00 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
