rs508686 chr20:3753334 C>A

Sequence
cctcattcaaattaattgtcttgg[C/A]agccagcttctggcctaaaatgcc
ASB in cell types
neural cell right lobe of liver

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
neural cell 1.94 -1.38 2.7·10-41.00 1.00
right lobe of liver 2.38 n/a 0.021.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd advanced age-related macular degeneration (geographic atrophy) hdl cholesterol refractive error rheumatoid arthritis total cholesterol
GTEx eQTL Esophagus_Muscularis Whole_Blood

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