rs5223 chr14:96204885 G>T
- Sequence
tccgaggaggggtggggacggtgg[G/T]gacggtggggacatcaggctgccc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- CREB1_HUMAN TCF21_HUMAN JUND_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREB1_HUMAN | -2.75 | 2.59 | 1.50 | n/a | No Hit | |||
| TCF21_HUMAN | 1.55 | n/a | 2.00 | n/a | n/a | |||
| JUND_HUMAN | n/a | 2.30 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3