rs5271 chr1:186680415 A>C
- Sequence
ctcctgacgctcactgcaagtcgt[A/C]tgacaattggtcgctaaccgagag
- ASB in cell types
- GM02630 (Fanconi anemi) monocytes from periferal blood GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- SRBP2_HUMAN STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 3.36 | n/a | 3.00 | n/a | No Hit | |||
| STAG1_HUMAN | 1.99 | -1.51 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.07 | -0.56 | 1.11 | n/a | No Hit |
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