rs533201 chr6:147285259 A>G
- Sequence
gtatttttgttcctctggtggcat[A/G]gcatttaagaagtaaaatgacacc
- ASB in cell types
- foreskin keratinocyte ID00014 (lymphoblastoid cell, DiGeorge syndrome) GM12891 (male B- cells lymphoblastoid cell line) CD34+ stem cells-derived erythroblasts
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.76 | 0.91 | 1.18 | n/a | No Hit | |||
| STAG1_HUMAN | 0.41 | 0.93 | 1.00 | n/a | n/a |
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